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Pack bio_analytics -- doc/Releases.txt |
TBD 20.09.06 EXAMPLES: mouse examples
go_frame()
in exp_go_over/1, default behaviour changed
23.06.02 DEPS: load <- library("ggplot2")
within the Prolog code- at run time
0.5 @ 22.01.02
23.01.02 IFACE: change bio_db map_ predicate names
22.12.21 CHANGED: remove '' from DE lists in exp_go_over/3
FIXED: properly propagate id modifiers in unversse of exp_go_over/3
IFACE: bio_symbols/3 uniform way to produce symbol lists
22.12.20 OPTS: new exp_go_over/3 opt(universe)
value: go
OPTS: new Org(anism): gallus
OPTS: new org_exp_id(ExpID)
adds more flexibilty to inputs
22.12.16 IFACE: exp_diffex/4 -> bio_diffex/4 (+ option which(dx(Up,Dw))
)
IFACE: new predicate, bio_volcano_plot/2
CHANGED: all R loads are now promised loads
22.12.15 OPTS: which(Up,Down)
returning indexes of selected
viz_de_opts()
new value diffex_only
IFACE: exp_go_over_string_graphs_multi/1
20.09.14 OPTS: de_mtx()
return or record diffex portion of matrix
20.09.09 OPTS: de_max()
maximum number of DEs
20.09.08 FIXED: replace / in go term name based filenames to OR
20.09.07 DEBUG: started channel ba(info)
(see debug_call(_,info,_)
)
DEBUG: removed edges (duplicate entries in string) are info displayed
OPTS: go_pair_ord()
in both exp_go_over_string_graphs/4 & go_string_graph/3
OPTS: universe(go_exp)
, combining experimental and go identifiers
20.09.06 IFACE: max_overs()
option
OPTS: standarised organism()
option to org()
IFACE: cohese()
option (only max, currently)
OPTIM: only look up half the string edges (ordered)
20.09.05 FIXED: bug on mgim_symbol order in exp_go_over
FIXED: bug, missing argument in go_over_universe_exp/4
OPTIM: pass existing list of DE into go_over_universe/5
20.09.03 OPTIM: convert maplist to a loop
IFACE: exp_diffex/4 can now return matrices
IFACE: exp_go_over_string_graphs/4 allows restriction
OPTS: stem_type()
more values and addition to exp_go_over_string_graphs/4
20.09.02 FIXED: lib(end(bio_db))
typo in loading code
0.3 @ 19.05.12 19.05.10 EXAMPLE: bt_over_go_string 19.05.09 CHANGED: edge_strg_symb/4 to org_edge_strg_symb/4
0.1 @ 19.04.22 19.03.05 IFACE: started collecting code into package